repair python

2024-10-11 09:45:04 +08:00 · 2024-10-11 09:45:04 +08:00 · 12f0f6be03
commit 12f0f6be03
parent 8e14ce4561
7 changed files with 283 additions and 458 deletions
--- a/.gitea/workflows/Flow.yaml
+++ b/.gitea/workflows/Flow.yaml
@ -14,307 +14,307 @@ jobs:
          context: python/cpu
          tags: eoelab.org:1027/${{ gitea.repository }}:py-c

-  SCIPY:
-    runs-on: runner
-    needs: Base
-    steps:
-      - name: checkout code
-        uses: https://eoelab.org:1027/actions/checkout@v4
-      - name: scipy build
-        uses: https://eoelab.org:1027/actions/build-push-action@v6
-        with:
-          context: ScienceCompute/scipy
-          tags: eoelab.org:1027/${{ gitea.repository }}:scipy
+  # SCIPY:
+  #   runs-on: runner
+  #   needs: Base
+  #   steps:
+  #     - name: checkout code
+  #       uses: https://eoelab.org:1027/actions/checkout@v4
+  #     - name: scipy build
+  #       uses: https://eoelab.org:1027/actions/build-push-action@v6
+  #       with:
+  #         context: ScienceCompute/scipy
+  #         tags: eoelab.org:1027/${{ gitea.repository }}:scipy

-  PYAI_C:
-    runs-on: runner
-    needs: Base
-    steps:
-      - name: checkout code
-        uses: https://eoelab.org:1027/actions/checkout@v4
-      - name: pyai-c build
-        uses: https://eoelab.org:1027/actions/build-push-action@v6
-        with:
-          context: ScienceCompute/pyai/cpu
-          tags: eoelab.org:1027/${{ gitea.repository }}:pyai-c
+  # PYAI_C:
+  #   runs-on: runner
+  #   needs: Base
+  #   steps:
+  #     - name: checkout code
+  #       uses: https://eoelab.org:1027/actions/checkout@v4
+  #     - name: pyai-c build
+  #       uses: https://eoelab.org:1027/actions/build-push-action@v6
+  #       with:
+  #         context: ScienceCompute/pyai/cpu
+  #         tags: eoelab.org:1027/${{ gitea.repository }}:pyai-c

-  SCRPY_C:
-    runs-on: runner
-    needs: Base
-    steps:
-      - name: checkout code
-        uses: https://eoelab.org:1027/actions/checkout@v4
-      - name: scrpy-c build
-        uses: https://eoelab.org:1027/actions/build-push-action@v6
-        with:
-          context: BigData/scrpy
-          tags: eoelab.org:1027/${{ gitea.repository }}:scrpy
+  # SCRPY_C:
+  #   runs-on: runner
+  #   needs: Base
+  #   steps:
+  #     - name: checkout code
+  #       uses: https://eoelab.org:1027/actions/checkout@v4
+  #     - name: scrpy-c build
+  #       uses: https://eoelab.org:1027/actions/build-push-action@v6
+  #       with:
+  #         context: BigData/scrpy
+  #         tags: eoelab.org:1027/${{ gitea.repository }}:scrpy

-  SQL:
-    runs-on: runner
-    needs: Base
-    steps:
-      - name: checkout code
-        uses: https://eoelab.org:1027/actions/checkout@v4
-      - name: scrpy-c build
-        uses: https://eoelab.org:1027/actions/build-push-action@v6
-        with:
-          context: BigData/sql
-          tags: eoelab.org:1027/${{ gitea.repository }}:sql
+  # SQL:
+  #   runs-on: runner
+  #   needs: Base
+  #   steps:
+  #     - name: checkout code
+  #       uses: https://eoelab.org:1027/actions/checkout@v4
+  #     - name: scrpy-c build
+  #       uses: https://eoelab.org:1027/actions/build-push-action@v6
+  #       with:
+  #         context: BigData/sql
+  #         tags: eoelab.org:1027/${{ gitea.repository }}:sql

-  PYSPARK:
-    runs-on: runner
-    needs: Base
-    steps:
-      - name: checkout code
-        uses: https://eoelab.org:1027/actions/checkout@v4
-      - name: pyspark build
-        uses: https://eoelab.org:1027/actions/build-push-action@v6
-        with:
-          context: BigData/pyspark
-          tags: eoelab.org:1027/${{ gitea.repository }}:pyspark
+  # PYSPARK:
+  #   runs-on: runner
+  #   needs: Base
+  #   steps:
+  #     - name: checkout code
+  #       uses: https://eoelab.org:1027/actions/checkout@v4
+  #     - name: pyspark build
+  #       uses: https://eoelab.org:1027/actions/build-push-action@v6
+  #       with:
+  #         context: BigData/pyspark
+  #         tags: eoelab.org:1027/${{ gitea.repository }}:pyspark

-  PYFLINK:
-    runs-on: runner
-    needs: Base
-    steps:
-      - name: checkout code
-        uses: https://eoelab.org:1027/actions/checkout@v4
-      - name: pyflink build
-        uses: https://eoelab.org:1027/actions/build-push-action@v6
-        with:
-          context: BigData/pyflink
-          tags: eoelab.org:1027/${{ gitea.repository }}:pyflink
+  # PYFLINK:
+  #   runs-on: runner
+  #   needs: Base
+  #   steps:
+  #     - name: checkout code
+  #       uses: https://eoelab.org:1027/actions/checkout@v4
+  #     - name: pyflink build
+  #       uses: https://eoelab.org:1027/actions/build-push-action@v6
+  #       with:
+  #         context: BigData/pyflink
+  #         tags: eoelab.org:1027/${{ gitea.repository }}:pyflink

-  AGDA:
-    runs-on: runner
-    needs: Base
-    steps:
-      - name: checkout code
-        uses: https://eoelab.org:1027/actions/checkout@v4
+  # AGDA:
+  #   runs-on: runner
+  #   needs: Base
+  #   steps:
+  #     - name: checkout code
+  #       uses: https://eoelab.org:1027/actions/checkout@v4

-  ANSIBLE:
-    runs-on: runner
-    needs: Base
-    steps:
-      - name: checkout code
-        uses: https://eoelab.org:1027/actions/checkout@v4
-      - name: ansible build
-        uses: https://eoelab.org:1027/actions/build-push-action@v6
-        with:
-          context: Program/ansible
-          tags: eoelab.org:1027/${{ gitea.repository }}:ansible
+  # ANSIBLE:
+  #   runs-on: runner
+  #   needs: Base
+  #   steps:
+  #     - name: checkout code
+  #       uses: https://eoelab.org:1027/actions/checkout@v4
+  #     - name: ansible build
+  #       uses: https://eoelab.org:1027/actions/build-push-action@v6
+  #       with:
+  #         context: Program/ansible
+  #         tags: eoelab.org:1027/${{ gitea.repository }}:ansible

-  C:
-    runs-on: runner
-    needs: Base
-    steps:
-      - name: checkout code
-        uses: https://eoelab.org:1027/actions/checkout@v4
-      - name: c build
-        uses: https://eoelab.org:1027/actions/build-push-action@v6
-        with:
-          context: Program/c
-          tags: eoelab.org:1027/${{ gitea.repository }}:c
+  # C:
+  #   runs-on: runner
+  #   needs: Base
+  #   steps:
+  #     - name: checkout code
+  #       uses: https://eoelab.org:1027/actions/checkout@v4
+  #     - name: c build
+  #       uses: https://eoelab.org:1027/actions/build-push-action@v6
+  #       with:
+  #         context: Program/c
+  #         tags: eoelab.org:1027/${{ gitea.repository }}:c

-  CADABRA2:
-    runs-on: runner
-    needs: Base
-    steps:
-      - name: checkout code
-        uses: https://eoelab.org:1027/actions/checkout@v4
-      - name: cadabra2 build
-        uses: https://eoelab.org:1027/actions/build-push-action@v6
-        with:
-          context: Program/cadabra2
-          tags: eoelab.org:1027/${{ gitea.repository }}:cadabra2
+  # CADABRA2:
+  #   runs-on: runner
+  #   needs: Base
+  #   steps:
+  #     - name: checkout code
+  #       uses: https://eoelab.org:1027/actions/checkout@v4
+  #     - name: cadabra2 build
+  #       uses: https://eoelab.org:1027/actions/build-push-action@v6
+  #       with:
+  #         context: Program/cadabra2
+  #         tags: eoelab.org:1027/${{ gitea.repository }}:cadabra2

-  CHAPEL:
-    runs-on: runner
-    needs: Base
-    steps:
-      - name: checkout code
-        uses: https://eoelab.org:1027/actions/checkout@v4
+  # CHAPEL:
+  #   runs-on: runner
+  #   needs: Base
+  #   steps:
+  #     - name: checkout code
+  #       uses: https://eoelab.org:1027/actions/checkout@v4

-  CPP:
-    runs-on: runner
-    needs: Base
-    steps:
-      - name: checkout code
-        uses: https://eoelab.org:1027/actions/checkout@v4
-      - name: cpp build
-        uses: https://eoelab.org:1027/actions/build-push-action@v6
-        with:
-          context: Program/cpp
-          tags: eoelab.org:1027/${{ gitea.repository }}:cpp
+  # CPP:
+  #   runs-on: runner
+  #   needs: Base
+  #   steps:
+  #     - name: checkout code
+  #       uses: https://eoelab.org:1027/actions/checkout@v4
+  #     - name: cpp build
+  #       uses: https://eoelab.org:1027/actions/build-push-action@v6
+  #       with:
+  #         context: Program/cpp
+  #         tags: eoelab.org:1027/${{ gitea.repository }}:cpp

-  JAVA:
-    runs-on: runner
-    needs: Base
-    steps:
-      - name: checkout code
-        uses: https://eoelab.org:1027/actions/checkout@v4
+  # JAVA:
+  #   runs-on: runner
+  #   needs: Base
+  #   steps:
+  #     - name: checkout code
+  #       uses: https://eoelab.org:1027/actions/checkout@v4

-  JS:
-    runs-on: runner
-    needs: Base
-    steps:
-      - name: checkout code
-        uses: https://eoelab.org:1027/actions/checkout@v4
-      - name: js build
-        uses: https://eoelab.org:1027/actions/build-push-action@v6
-        with:
-          context: Program/js
-          tags: eoelab.org:1027/${{ gitea.repository }}:js
+  # JS:
+  #   runs-on: runner
+  #   needs: Base
+  #   steps:
+  #     - name: checkout code
+  #       uses: https://eoelab.org:1027/actions/checkout@v4
+  #     - name: js build
+  #       uses: https://eoelab.org:1027/actions/build-push-action@v6
+  #       with:
+  #         context: Program/js
+  #         tags: eoelab.org:1027/${{ gitea.repository }}:js

-  JULIA:
-    runs-on: runner
-    needs: Base
-    steps:
-      - name: checkout code
-        uses: https://eoelab.org:1027/actions/checkout@v4
-      - name: julia build
-        uses: https://eoelab.org:1027/actions/build-push-action@v6
-        with:
-          context: Program/julia
-          tags: eoelab.org:1027/${{ gitea.repository }}:julia
+  # JULIA:
+  #   runs-on: runner
+  #   needs: Base
+  #   steps:
+  #     - name: checkout code
+  #       uses: https://eoelab.org:1027/actions/checkout@v4
+  #     - name: julia build
+  #       uses: https://eoelab.org:1027/actions/build-push-action@v6
+  #       with:
+  #         context: Program/julia
+  #         tags: eoelab.org:1027/${{ gitea.repository }}:julia

-  LUA:
-    runs-on: runner
-    needs: Base
-    steps:
-      - name: checkout code
-        uses: https://eoelab.org:1027/actions/checkout@v4
-      - name: lua build
-        uses: https://eoelab.org:1027/actions/build-push-action@v6
-        with:
-          context: Program/lua
-          tags: eoelab.org:1027/${{ gitea.repository }}:lua
+  # LUA:
+  #   runs-on: runner
+  #   needs: Base
+  #   steps:
+  #     - name: checkout code
+  #       uses: https://eoelab.org:1027/actions/checkout@v4
+  #     - name: lua build
+  #       uses: https://eoelab.org:1027/actions/build-push-action@v6
+  #       with:
+  #         context: Program/lua
+  #         tags: eoelab.org:1027/${{ gitea.repository }}:lua


-  R:
-    runs-on: runner
-    needs: Base
-    steps:
-      - name: checkout code
-        uses: https://eoelab.org:1027/actions/checkout@v4
-      - name: r build
-        uses: https://eoelab.org:1027/actions/build-push-action@v6
-        with:
-          context: Program/r
-          tags: eoelab.org:1027/${{ gitea.repository }}:r
+  # R:
+  #   runs-on: runner
+  #   needs: Base
+  #   steps:
+  #     - name: checkout code
+  #       uses: https://eoelab.org:1027/actions/checkout@v4
+  #     - name: r build
+  #       uses: https://eoelab.org:1027/actions/build-push-action@v6
+  #       with:
+  #         context: Program/r
+  #         tags: eoelab.org:1027/${{ gitea.repository }}:r

-  NOVNC:
-    runs-on: runner
-    needs: Base
-    steps:
-      - name: checkout code
-        uses: https://eoelab.org:1027/actions/checkout@v4
-      - name: novnc build
-        uses: https://eoelab.org:1027/actions/build-push-action@v6
-        with:
-          context: Gui/novnc
-          tags: eoelab.org:1027/${{ gitea.repository }}:novnc
+  # NOVNC:
+  #   runs-on: runner
+  #   needs: Base
+  #   steps:
+  #     - name: checkout code
+  #       uses: https://eoelab.org:1027/actions/checkout@v4
+  #     - name: novnc build
+  #       uses: https://eoelab.org:1027/actions/build-push-action@v6
+  #       with:
+  #         context: Gui/novnc
+  #         tags: eoelab.org:1027/${{ gitea.repository }}:novnc

-  PYQT6:
-    runs-on: runner
-    needs: NOVNC
-    steps:
-      - name: checkout code
-        uses: https://eoelab.org:1027/actions/checkout@v4
-      - name: pyqt6 build
-        uses: https://eoelab.org:1027/actions/build-push-action@v6
-        with:
-          context: Gui/pyqt6
-          tags: eoelab.org:1027/${{ gitea.repository }}:pyqt6
+  # PYQT6:
+  #   runs-on: runner
+  #   needs: NOVNC
+  #   steps:
+  #     - name: checkout code
+  #       uses: https://eoelab.org:1027/actions/checkout@v4
+  #     - name: pyqt6 build
+  #       uses: https://eoelab.org:1027/actions/build-push-action@v6
+  #       with:
+  #         context: Gui/pyqt6
+  #         tags: eoelab.org:1027/${{ gitea.repository }}:pyqt6

-  OCTAVE:
-    runs-on: runner
-    needs: Base
-    steps:
-      - name: checkout code
-        uses: https://eoelab.org:1027/actions/checkout@v4
-      - name: octave build
-        uses: https://eoelab.org:1027/actions/build-push-action@v6
-        with:
-          context: Math/octave
-          tags: eoelab.org:1027/${{ gitea.repository }}:octave
+  # OCTAVE:
+  #   runs-on: runner
+  #   needs: Base
+  #   steps:
+  #     - name: checkout code
+  #       uses: https://eoelab.org:1027/actions/checkout@v4
+  #     - name: octave build
+  #       uses: https://eoelab.org:1027/actions/build-push-action@v6
+  #       with:
+  #         context: Math/octave
+  #         tags: eoelab.org:1027/${{ gitea.repository }}:octave

-  SAGEMATH:
-    runs-on: runner
-    needs: Base
-    steps:
-      - name: checkout code
-        uses: https://eoelab.org:1027/actions/checkout@v4
-      - name: sagemath build
-        uses: https://eoelab.org:1027/actions/build-push-action@v6
-        with:
-          context: Math/sagemath
-          tags: eoelab.org:1027/${{ gitea.repository }}:sage
+  # SAGEMATH:
+  #   runs-on: runner
+  #   needs: Base
+  #   steps:
+  #     - name: checkout code
+  #       uses: https://eoelab.org:1027/actions/checkout@v4
+  #     - name: sagemath build
+  #       uses: https://eoelab.org:1027/actions/build-push-action@v6
+  #       with:
+  #         context: Math/sagemath
+  #         tags: eoelab.org:1027/${{ gitea.repository }}:sage

-  SCILAB:
-    runs-on: runner
-    needs: Base
-    steps:
-      - name: checkout code
-        uses: https://eoelab.org:1027/actions/checkout@v4
-      - name: scilab build
-        uses: https://eoelab.org:1027/actions/build-push-action@v6
-        with:
-          context: Math/scilab
-          tags: eoelab.org:1027/${{ gitea.repository }}:scilab
+  # SCILAB:
+  #   runs-on: runner
+  #   needs: Base
+  #   steps:
+  #     - name: checkout code
+  #       uses: https://eoelab.org:1027/actions/checkout@v4
+  #     - name: scilab build
+  #       uses: https://eoelab.org:1027/actions/build-push-action@v6
+  #       with:
+  #         context: Math/scilab
+  #         tags: eoelab.org:1027/${{ gitea.repository }}:scilab

-  MAPLE:
-    runs-on: runner
-    needs: Base
-    steps:
-      - name: checkout code
-        uses: https://eoelab.org:1027/actions/checkout@v4
-      - name: maple build
-        uses: https://eoelab.org:1027/actions/build-push-action@v6
-        with:
-          context: Math/maple
-          tags: eoelab.org:1027/${{ gitea.repository }}:maple
+  # MAPLE:
+  #   runs-on: runner
+  #   needs: Base
+  #   steps:
+  #     - name: checkout code
+  #       uses: https://eoelab.org:1027/actions/checkout@v4
+  #     - name: maple build
+  #       uses: https://eoelab.org:1027/actions/build-push-action@v6
+  #       with:
+  #         context: Math/maple
+  #         tags: eoelab.org:1027/${{ gitea.repository }}:maple

-  MMA:
-    runs-on: runner
-    needs: Base
-    steps:
-      - name: checkout code
-        uses: https://eoelab.org:1027/actions/checkout@v4
-      - name: mma build
-        uses: https://eoelab.org:1027/actions/build-push-action@v6
-        with:
-          context: Math/mathematica
-          tags: eoelab.org:1027/${{ gitea.repository }}:mma
+  # MMA:
+  #   runs-on: runner
+  #   needs: Base
+  #   steps:
+  #     - name: checkout code
+  #       uses: https://eoelab.org:1027/actions/checkout@v4
+  #     - name: mma build
+  #       uses: https://eoelab.org:1027/actions/build-push-action@v6
+  #       with:
+  #         context: Math/mathematica
+  #         tags: eoelab.org:1027/${{ gitea.repository }}:mma

-  MATLAB_MINIMAL:
-    runs-on: runner
-    needs: Base
-    steps:
-      - name: checkout code
-        uses: https://eoelab.org:1027/actions/checkout@v4
-      - name: matlab build
-        uses: https://eoelab.org:1027/actions/build-push-action@v6
-        with:
-          context: Math/matlab/minimal
-          tags: eoelab.org:1027/${{ gitea.repository }}:matlab-minimal
+  # MATLAB_MINIMAL:
+  #   runs-on: runner
+  #   needs: Base
+  #   steps:
+  #     - name: checkout code
+  #       uses: https://eoelab.org:1027/actions/checkout@v4
+  #     - name: matlab build
+  #       uses: https://eoelab.org:1027/actions/build-push-action@v6
+  #       with:
+  #         context: Math/matlab/minimal
+  #         tags: eoelab.org:1027/${{ gitea.repository }}:matlab-minimal

-  MATLAB_MCM:
-    runs-on: runner
-    needs: MATLAB_MINIMAL
-    steps:
-      - name: checkout code
-        uses: https://eoelab.org:1027/actions/checkout@v4
-      - name: matlab-mcm build
-        uses: https://eoelab.org:1027/actions/build-push-action@v6
-        with:
-          context: Math/matlab/mcm
-          tags: eoelab.org:1027/${{ gitea.repository }}:matlab-mcm
+  # MATLAB_MCM:
+  #   runs-on: runner
+  #   needs: MATLAB_MINIMAL
+  #   steps:
+  #     - name: checkout code
+  #       uses: https://eoelab.org:1027/actions/checkout@v4
+  #     - name: matlab-mcm build
+  #       uses: https://eoelab.org:1027/actions/build-push-action@v6
+  #       with:
+  #         context: Math/matlab/mcm
+  #         tags: eoelab.org:1027/${{ gitea.repository }}:matlab-mcm

  Push:
    runs-on: runner
-    needs: [OCTAVE] #MATLAB_MCM, MAPLE, MMA
+    needs: [Base] #MATLAB_MCM, MAPLE, MMA
    steps:
      - name: login gitea_registry
        uses: https://eoelab.org:1027/actions/login-action@v3
--- a/python/cpu/Dockerfile
+++ b/python/cpu/Dockerfile
@ -9,28 +9,31 @@ ENV DEBIAN_FRONTEND=noninteractive \
    NB_USER=jovyan \
    NB_UID=1000 \
    NB_GID=100 \
+    SHELL=/bin/bash \
    PATH="/opt/base/bin:${PATH}" \
    HOME="/home/jovyan"

 # Copy files
-COPY conf/profile /etc/
 COPY start-sh/* /usr/local/bin/
-COPY conf/jupyter_server_config.py /etc/jupyter/

 RUN sed -i 's/deb.debian.org/mirrors.ustc.edu.cn/g' /etc/apt/sources.list.d/debian.sources && \
+    # install base packages
    apt-get update --yes && apt-get install --yes --no-install-recommends sudo tini unzip python3-venv && \
    apt-get clean && rm -rf /var/lib/apt/lists/* && \
    chmod a+rx /usr/local/bin/* && \
+    # Create user , set password and add to sudoers
    useradd -l -m -s /bin/bash -N -u "${NB_UID}" "${NB_USER}" && \
    usermod -aG sudo "${NB_USER}" && echo "${NB_USER} ALL=(ALL) NOPASSWD:ALL" >> /etc/sudoers  && \
    chmod g+w /etc/passwd && \
+    # Create dirs for startup hooks
    mkdir /usr/local/bin/start-notebook.d && mkdir /usr/local/bin/before-notebook.d && \
+    # setup base venv & pip_mirror
    mkdir -p "/opt/base/" && python3 -m venv /opt/base && chown -hR "${NB_USER}:${NB_GID}" "/opt/base" && \
    echo '[global]\nindex-url = https://mirrors.bfsu.edu.cn/pypi/web/simple' >  /etc/pip.conf

 USER ${NB_UID}

-# install jupyter python mamba extension
+# install jupyter extension
 RUN pip install 'jupyterlab' 'jupyterhub' && \
    pip install jupyterlab-language-pack-zh-CN jupyterlab_tabnine && \
    pip cache purge 
--- a/python/cpu/conf/jupyter_server_config.py
+++ b/python/cpu/conf/jupyter_server_config.py
@ -1,61 +0,0 @@
-# Copyright (c) Jupyter Development Team.
-# Distributed under the terms of the Modified BSD License.
-# mypy: ignore-errors
-import os
-import stat
-import subprocess
-from pathlib import Path
-
-from jupyter_core.paths import jupyter_data_dir
-
-c = get_config()  # noqa: F821
-c.ServerApp.ip = "0.0.0.0"
-c.ServerApp.open_browser = False
-
-# to output both image/svg+xml and application/pdf plot formats in the notebook file
-c.InlineBackend.figure_formats = {"png", "jpeg", "svg", "pdf"}
-
-# https://github.com/jupyter/notebook/issues/3130
-c.FileContentsManager.delete_to_trash = False
-
-# config hide file
-c.FileContentsManager.hide_globs=[]
-
-# Generate a self-signed certificate
-OPENSSL_CONFIG = """\
-[req]
-distinguished_name = req_distinguished_name
-[req_distinguished_name]
-"""
-if "GEN_CERT" in os.environ:
-    dir_name = Path(jupyter_data_dir())
-    dir_name.mkdir(parents=True, exist_ok=True)
-    pem_file = dir_name / "notebook.pem"
-
-    # Generate an openssl.cnf file to set the distinguished name
-    cnf_file = Path(os.getenv("CONDA_DIR", "/usr/lib")) / "ssl/openssl.cnf"
-    if not cnf_file.exists():
-        cnf_file.write_text(OPENSSL_CONFIG)
-
-    # Generate a certificate if one doesn't exist on disk
-    subprocess.check_call(
-        [
-            "openssl",
-            "req",
-            "-new",
-            "-newkey=rsa:2048",
-            "-days=365",
-            "-nodes",
-            "-x509",
-            "-subj=/C=XX/ST=XX/L=XX/O=generated/CN=generated",
-            f"-keyout={pem_file}",
-            f"-out={pem_file}",
-        ]
-    )
-    # Restrict access to the file
-    pem_file.chmod(stat.S_IRUSR | stat.S_IWUSR)
-    c.ServerApp.certfile = str(pem_file)
-
-# Change default umask for all subprocesses of the Server if set in the environment
-if "NB_UMASK" in os.environ:
-    os.umask(int(os.environ["NB_UMASK"], 8))
--- a/python/cpu/conf/profile
+++ b/python/cpu/conf/profile
@ -1,29 +0,0 @@
-# /etc/profile: system-wide .profile file for the Bourne shell (sh(1))
-# and Bourne compatible shells (bash(1), ksh(1), ash(1), ...).
-
-# del the PATH
-
-if [ "${PS1-}" ]; then
-  if [ "${BASH-}" ] && [ "$BASH" != "/bin/sh" ]; then
-    # The file bash.bashrc already sets the default PS1.
-    # PS1='\h:\w\$ '
-    if [ -f /etc/bash.bashrc ]; then
-      . /etc/bash.bashrc
-    fi
-  else
-    if [ "$(id -u)" -eq 0 ]; then
-      PS1='# '
-    else
-      PS1='$ '
-    fi
-  fi
-fi
-
-if [ -d /etc/profile.d ]; then
-  for i in /etc/profile.d/*.sh; do
-    if [ -r $i ]; then
-      . $i
-    fi
-  done
-  unset i
-fi
--- a/python/gpu/Dockerfile
+++ b/python/gpu/Dockerfile
@ -13,24 +13,26 @@ ENV DEBIAN_FRONTEND=noninteractive \
    HOME="/home/jovyan"

 # Copy files
-COPY conf/profile /etc/
 COPY start-sh/* /usr/local/bin/
-COPY conf/jupyter_server_config.py /etc/jupyter/

 RUN sed -i 's/deb.debian.org/mirrors.ustc.edu.cn/g' /etc/apt/sources.list.d/debian.sources && \
+    # install base packages
    apt-get update --yes && apt-get install --yes --no-install-recommends sudo tini unzip python3-venv && \
    apt-get clean && rm -rf /var/lib/apt/lists/* && \
    chmod a+rx /usr/local/bin/* && \
+    # Create user , set password and add to sudoers
    useradd -l -m -s /bin/bash -N -u "${NB_UID}" "${NB_USER}" && \
    usermod -aG sudo "${NB_USER}" && echo "${NB_USER} ALL=(ALL) NOPASSWD:ALL" >> /etc/sudoers  && \
    chmod g+w /etc/passwd && \
+    # Create dirs for startup hooks
    mkdir /usr/local/bin/start-notebook.d && mkdir /usr/local/bin/before-notebook.d && \
+    # setup base venv & pip_mirror
    mkdir -p "/opt/base/" && python3 -m venv /opt/base && chown -hR "${NB_USER}:${NB_GID}" "/opt/base" && \
    echo '[global]\nindex-url = https://mirrors.bfsu.edu.cn/pypi/web/simple' >  /etc/pip.conf

 USER ${NB_UID}

-# install jupyter python mamba extension
+# install jupyter extension
 RUN pip install 'jupyterlab' 'jupyterhub' && \
    pip install jupyterlab-language-pack-zh-CN jupyterlab_tabnine && \
    pip cache purge 
--- a/python/gpu/conf/jupyter_server_config.py
+++ b/python/gpu/conf/jupyter_server_config.py
@ -1,61 +0,0 @@
-# Copyright (c) Jupyter Development Team.
-# Distributed under the terms of the Modified BSD License.
-# mypy: ignore-errors
-import os
-import stat
-import subprocess
-from pathlib import Path
-
-from jupyter_core.paths import jupyter_data_dir
-
-c = get_config()  # noqa: F821
-c.ServerApp.ip = "0.0.0.0"
-c.ServerApp.open_browser = False
-
-# to output both image/svg+xml and application/pdf plot formats in the notebook file
-c.InlineBackend.figure_formats = {"png", "jpeg", "svg", "pdf"}
-
-# https://github.com/jupyter/notebook/issues/3130
-c.FileContentsManager.delete_to_trash = False
-
-# config hide file
-c.FileContentsManager.hide_globs=['__pycache__']
-
-# Generate a self-signed certificate
-OPENSSL_CONFIG = """\
-[req]
-distinguished_name = req_distinguished_name
-[req_distinguished_name]
-"""
-if "GEN_CERT" in os.environ:
-    dir_name = Path(jupyter_data_dir())
-    dir_name.mkdir(parents=True, exist_ok=True)
-    pem_file = dir_name / "notebook.pem"
-
-    # Generate an openssl.cnf file to set the distinguished name
-    cnf_file = Path(os.getenv("CONDA_DIR", "/usr/lib")) / "ssl/openssl.cnf"
-    if not cnf_file.exists():
-        cnf_file.write_text(OPENSSL_CONFIG)
-
-    # Generate a certificate if one doesn't exist on disk
-    subprocess.check_call(
-        [
-            "openssl",
-            "req",
-            "-new",
-            "-newkey=rsa:2048",
-            "-days=365",
-            "-nodes",
-            "-x509",
-            "-subj=/C=XX/ST=XX/L=XX/O=generated/CN=generated",
-            f"-keyout={pem_file}",
-            f"-out={pem_file}",
-        ]
-    )
-    # Restrict access to the file
-    pem_file.chmod(stat.S_IRUSR | stat.S_IWUSR)
-    c.ServerApp.certfile = str(pem_file)
-
-# Change default umask for all subprocesses of the Server if set in the environment
-if "NB_UMASK" in os.environ:
-    os.umask(int(os.environ["NB_UMASK"], 8))
--- a/python/gpu/conf/profile
+++ b/python/gpu/conf/profile
@ -1,29 +0,0 @@
-# /etc/profile: system-wide .profile file for the Bourne shell (sh(1))
-# and Bourne compatible shells (bash(1), ksh(1), ash(1), ...).
-
-# del the PATH
-
-if [ "${PS1-}" ]; then
-  if [ "${BASH-}" ] && [ "$BASH" != "/bin/sh" ]; then
-    # The file bash.bashrc already sets the default PS1.
-    # PS1='\h:\w\$ '
-    if [ -f /etc/bash.bashrc ]; then
-      . /etc/bash.bashrc
-    fi
-  else
-    if [ "$(id -u)" -eq 0 ]; then
-      PS1='# '
-    else
-      PS1='$ '
-    fi
-  fi
-fi
-
-if [ -d /etc/profile.d ]; then
-  for i in /etc/profile.d/*.sh; do
-    if [ -r $i ]; then
-      . $i
-    fi
-  done
-  unset i
-fi