Repair various type errors

jax/_src/numpy/lax_numpy.py

@@ -32,8 +32,8 @@ from functools import partial
 import math
 import operator
 import types
-from typing import (overload, Any, Callable, Literal, NamedTuple, Protocol,
-                    TypeVar, Union)
+from typing import (cast, overload, Any, Callable, Literal, NamedTuple,
+                    Protocol, TypeVar, Union)
 from textwrap import dedent as _dedent
 import warnings
 
@@ -851,10 +851,12 @@ def unravel_index(indices: ArrayLike, shape: Shape) -> tuple[Array, ...]:
   try:
     shape = list(shape)
   except TypeError:
-    shape = [shape]
+    # TODO: Consider warning here since shape is supposed to be a sequence, so
+    # this should not happen.
+    shape = cast(list[Any], [shape])
   if any(ndim(s) != 0 for s in shape):
     raise ValueError("unravel_index: shape should be a scalar or 1D sequence.")
-  out_indices = [0] * len(shape)
+  out_indices: list[ArrayLike] = [0] * len(shape)
   for i, s in reversed(list(enumerate(shape))):
     indices_arr, out_indices[i] = ufuncs.divmod(indices_arr, s)
   oob_pos = indices_arr > 0
@@ -1137,7 +1139,12 @@ def where(
   else:
     util.check_arraylike("where", acondition, if_true, if_false)
     if size is not None or fill_value is not None:
-      raise ValueError("size and fill_value arguments cannot be used in three-term where function.")
+      raise ValueError("size and fill_value arguments cannot be used in "
+                       "three-term where function.")
+    if if_true is None or if_false is None:
+      raise ValueError("Either both or neither of the x and y arguments "
+                       "should be provided to jax.numpy.where, got "
+                       f"{if_true} and {if_false}.")
     return util._where(acondition, if_true, if_false)
 
 

jax/_src/numpy/polynomial.py

@@ -46,7 +46,7 @@ def _roots_no_zeros(p: Array) -> Array:
 
 
 @jit
-def _roots_with_zeros(p: Array, num_leading_zeros: int) -> Array:
+def _roots_with_zeros(p: Array, num_leading_zeros: Array | int) -> Array:
   # Avoid lapack errors when p is all zero
   p = _where(len(p) == num_leading_zeros, 1.0, p)
   # Roll any leading zeros to the end & compute the roots
@@ -85,7 +85,7 @@ strip_zeros : bool, default=True
 """)
 def roots(p: ArrayLike, *, strip_zeros: bool = True) -> Array:
   check_arraylike("roots", p)
-  p_arr = atleast_1d(*promote_dtypes_inexact(p))
+  p_arr = atleast_1d(promote_dtypes_inexact(p)[0])
   if p_arr.ndim != 1:
     raise ValueError("Input must be a rank-1 array.")
   if p_arr.size < 2:
@@ -96,7 +96,7 @@ def roots(p: ArrayLike, *, strip_zeros: bool = True) -> Array:
     num_leading_zeros = core.concrete_or_error(int, num_leading_zeros,
       "The error occurred in the jnp.roots() function. To use this within a "
       "JIT-compiled context, pass strip_zeros=False, but be aware that leading zeros "
-      "will be result in some returned roots being set to NaN.")
+      "will result in some returned roots being set to NaN.")
     return _roots_no_zeros(p_arr[num_leading_zeros:])
   else:
     return _roots_with_zeros(p_arr, num_leading_zeros)

jax/_src/state/types.py

@@ -18,7 +18,7 @@ from __future__ import annotations
 from collections.abc import Sequence
 import dataclasses
 import math
-from typing import Any, Generic, TypeVar, Union
+from typing import Any, Union
 
 from jax._src import core
 from jax._src import effects
@@ -74,8 +74,6 @@ StateEffect = Union[ReadEffect, WriteEffect, AccumEffect]
 
 # ## `Ref`s
 
-Aval = TypeVar("Aval", bound=core.AbstractValue)
-
 @dataclasses.dataclass
 class RefIndexer:
   ref_or_view: Any
@@ -124,7 +122,7 @@ class RefView:
 
 
 # We need an aval for `Ref`s so we can represent `get` and `swap` in Jaxprs.
-class AbstractRef(core.AbstractValue, Generic[Aval]):
+class AbstractRef(core.AbstractValue):
   __slots__ = ["inner_aval"]
 
   def __init__(self, inner_aval: core.AbstractValue):
@@ -212,6 +210,6 @@ def get_ref_state_effects(
 
 def shaped_array_ref(shape: tuple[int, ...], dtype,
                      weak_type: bool = False,
-                     named_shape = None) -> AbstractRef[core.AbstractValue]:
+                     named_shape = None) -> AbstractRef:
   return AbstractRef(core.ShapedArray(shape, dtype, weak_type=weak_type,
                                       named_shape=named_shape))

jax/_src/util.py

@@ -138,10 +138,13 @@ def partition_list(bs: Sequence[bool], l: Sequence[T]) -> tuple[list[T], list[T]
     lists[b].append(x)
   return lists
 
-def merge_lists(bs: Sequence[bool], l0: Sequence[T], l1: Sequence[T]) -> list[T]:
+def merge_lists(bs: Sequence[bool],
+                l0: Sequence[T1],
+                l1: Sequence[T2]
+                ) -> list[T1 | T2]:
   assert sum(bs) == len(l1) and len(bs) - sum(bs) == len(l0)
   i0, i1 = iter(l0), iter(l1)
-  out = [next(i1) if b else next(i0) for b in bs]
+  out: list[T1 | T2] = [next(i1) if b else next(i0) for b in bs]
   sentinel = object()
   assert next(i0, sentinel) is next(i1, sentinel) is sentinel
   return out