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commit 79b8cbf0cb47e32743e0970bc1abeb6a673866a8 Author: Corey Adams <corey.adams@anl.gov> Date: Mon Jul 1 14:14:15 2024 -0500 Fix mypy issues; change variable name to more universally known name commit 10edc866f568908e536e5c7bd6b59b4e5351781e Author: Corey Adams <corey.adams@anl.gov> Date: Thu Jun 27 13:25:32 2024 -0500 Change copyright year to the year this was authored commit f7086cb44cc98d58a96ae804dcd1787bc31470f7 Author: Corey Adams <corey.adams@anl.gov> Date: Thu Jun 27 13:15:32 2024 -0500 Update build file to include mpi4py cluster. commit 6235eb311b9fca2bd81fe1c49456d164b7332753 Author: Corey adams <coreyjadams@gmail.com> Date: Thu Jun 27 12:11:48 2024 -0500 Update distributed.py Clean up documentation slightly. commit ef3a2e220945b2158cf20edeb1e04bbbf8f290ff Author: Corey adams <coreyjadams@gmail.com> Date: Thu Jun 27 12:09:37 2024 -0500 Update mpi4py_cluster.py Further clean up unneeded comments. commit 6cc07a9a52fc202ecc65c04c513096391c27d02d Author: Corey adams <coreyjadams@gmail.com> Date: Thu Jun 27 12:08:38 2024 -0500 Update mpi4py_cluster.py Remove unneeded commented code. commit 6701bd1a9d645a0e08d95df1692f43946f0a5eb8 Merge: 5a91ac342 98b87540a Author: Corey adams <coreyjadams@gmail.com> Date: Thu Jun 27 12:07:25 2024 -0500 Merge branch 'google:main' into main commit 5a91ac34248afa6f65af3cae66df7d0d122c1d26 Merge: 301bbc67f 6c51234f9 Author: Corey adams <coreyjadams@gmail.com> Date: Tue May 28 22:14:08 2024 -0500 Merge branch 'google:main' into main commit 301bbc67f938bc30c543cf300cec8a9c75f3eef8 Author: Corey Adams <corey.adams@anl.gov> Date: Tue May 28 11:34:51 2024 -0500 Add test to verify mpi4py based distributed initialization commit 19e66949a36bb0edb4cd66b0f170f42b326928ec Author: Corey Adams <corey.adams@anl.gov> Date: Tue May 28 11:14:40 2024 -0500 Unify variable naming and fix function argument ordering commit 72fe093042519e48d9c26b7ede3b266c7a850be6 Author: Corey Adams <corey.adams@anl.gov> Date: Tue May 28 10:56:25 2024 -0500 Remove unmerged code commit 3a96e738a3cdf9b6ed194cb764fa5640a37f6b95 Merge: e4fd97e19 ff3db9b3a Author: Corey adams <coreyjadams@gmail.com> Date: Tue May 28 10:51:41 2024 -0500 Merge branch 'google:main' into main commit e4fd97e197211921fb6911054592041015af94ef Merge: a69729900 72a81e58e Author: Corey adams <coreyjadams@gmail.com> Date: Mon May 13 16:01:35 2024 -0500 Merge branch 'google:main' into main commit a6972990070d5d2f405d5ede9f82d35c7e6d157a Merge: 85bcf42bd 1e48adc69 Author: Corey adams <coreyjadams@gmail.com> Date: Mon May 13 14:21:32 2024 -0500 Merge branch 'google:main' into main commit 85bcf42bdd36ad88a3d287c357cd12fde74c7fc0 Merge: af1a4f0a1 06cd05d1d Author: Corey Adams <corey.adams@anl.gov> Date: Tue Apr 16 09:09:31 2024 -0500 Merge branch 'main' of https://github.com/google/jax commit af1a4f0a12008780e9507d1bdd91e9d11ec35916 Author: Corey Adams <corey.adams@anl.gov> Date: Tue Apr 16 08:58:33 2024 -0500 update documentation and elaborate on spec_detect_method variable commit 01f4709d5ecd4af675f4fb23d02d6a69b927adac Author: Corey Adams <corey.adams@anl.gov> Date: Tue Apr 16 08:45:38 2024 -0500 Address feedback and comments on PR 20174; fix typo in documentation. commit 4f22d86e7358c29ed588267a7d91fe55fb94f143 Merge: 900a0372f 71ec6e33c Author: Corey adams <coreyjadams@gmail.com> Date: Mon Mar 11 11:51:30 2024 -0500 Merge branch 'google:main' into main commit 900a0372f6147d3c9ab53c95b6a4262e5cfe4457 Author: Corey Adams <corey.adams@anl.gov> Date: Mon Mar 11 11:50:48 2024 -0500 Auto-detect of mpi4py-based configuration is now strictly opt-in. commit 1992969da6164e456492fe0f9cd4287f6d8f03cf Author: Corey Adams <corey.adams@anl.gov> Date: Thu Mar 7 12:27:43 2024 -0600 Enable automatic detection of distrbuted variables with any configuration of MPI, as long as mpi4py is available
This commit is contained in:
parent
484d09f4af
commit
ffc9292365
@ -952,6 +952,7 @@ pytype_strict_library(
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"_src/clusters/cluster.py",
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"_src/clusters/ompi_cluster.py",
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"_src/clusters/slurm_cluster.py",
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"_src/clusters/mpi4py_cluster.py",
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"_src/distributed.py",
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"_src/xla_bridge.py",
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],
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@ -22,5 +22,6 @@ from .cluster import ClusterEnv
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# available one from the list will be picked.
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from .ompi_cluster import OmpiCluster
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from .slurm_cluster import SlurmCluster
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from .mpi4py_cluster import Mpi4pyCluster
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from .cloud_tpu_cluster import GkeTpuCluster
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from .cloud_tpu_cluster import GceTpuCluster
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@ -74,6 +74,9 @@ def has_megascale_address():
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return get_tpu_env_value('MEGASCALE_COORDINATOR_ADDRESS') is not None
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class BaseTpuCluster(clusters.ClusterEnv):
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name: str = "tpu"
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"""Abstract cluster supports both single and multislice TPU environments.
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If MEGASCALE_COORDINATOR_ADDRESS is not set, we assume single slice topology.
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@ -169,6 +172,9 @@ class BaseTpuCluster(clusters.ClusterEnv):
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raise NotImplementedError()
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class GceTpuCluster(BaseTpuCluster):
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name: str = "gcetpu"
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@classmethod
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def is_env_present(cls) -> bool:
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if not running_in_cloud_tpu_vm:
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@ -194,6 +200,9 @@ class GceTpuCluster(BaseTpuCluster):
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return [worker.split(':')[2] for worker in workers]
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class GkeTpuCluster(BaseTpuCluster):
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name: str = "gketpu"
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@classmethod
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def is_env_present(cls) -> bool:
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if running_in_cloud_tpu_vm and os.environ.get("TPU_WORKER_HOSTNAMES") is not None:
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@ -31,11 +31,13 @@ class ClusterEnv:
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"""
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_cluster_types: list[type[ClusterEnv]] = []
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opt_in_only_method: bool = False # Override this in derived classes if necessary
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def __init_subclass__(cls, **kwargs):
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super().__init_subclass__(**kwargs)
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cls._cluster_types.append(cls)
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@classmethod
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# pytype: disable=bad-return-type
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def auto_detect_unset_distributed_params(cls,
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@ -43,14 +45,33 @@ class ClusterEnv:
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num_processes: int | None,
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process_id: int | None,
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local_device_ids: Sequence[int] | None,
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cluster_detection_method: str | None,
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initialization_timeout: int | None,
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) -> tuple[str | None, int | None, int | None,
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Sequence[int] | None]:
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if all(p is not None for p in (coordinator_address, num_processes,
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process_id, local_device_ids)):
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return (coordinator_address, num_processes, process_id,
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local_device_ids)
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env = next((env for env in cls._cluster_types if env.is_env_present()), None)
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# First, we check the spec detection method because it will ignore submitted values
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# If if succeeds.
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if cluster_detection_method is not None:
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env = next( (env for env in cls._cluster_types if env.name == cluster_detection_method), None )
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if env is None:
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logger.error(f"Automatic Distributed initialization can not proceed:"
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f" {cluster_detection_method} is not supported.")
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elif not env.is_env_present():
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logger.error(f"Automatic Distributed initialization can not proceed:"
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f" {cluster_detection_method} is supported but not functional in this environment.")
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else:
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env = next((env for env in cls._cluster_types if env.opt_in_only_method == False and env.is_env_present()), None)
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# Above: I have wrapped the env selection in a conditional to go through
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# opt-in methods first (currently only mpi4py) but to check all possible options
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# otherwise. Passing no cluster_detection_method results in the default, original behavior.
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if env:
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logger.debug('Initializing distributed JAX environment via %s', env.__name__)
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if coordinator_address is None:
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93
jax/_src/clusters/mpi4py_cluster.py
Normal file
93
jax/_src/clusters/mpi4py_cluster.py
Normal file
@ -0,0 +1,93 @@
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# Copyright 2024 The JAX Authors.
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#
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# Licensed under the Apache License, Version 2.0 (the "License");
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# you may not use this file except in compliance with the License.
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# You may obtain a copy of the License at
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#
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# https://www.apache.org/licenses/LICENSE-2.0
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#
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# Unless required by applicable law or agreed to in writing, software
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# distributed under the License is distributed on an "AS IS" BASIS,
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# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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# See the License for the specific language governing permissions and
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# limitations under the License.
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from __future__ import annotations
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from jax._src import clusters
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import socket
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from importlib.util import find_spec
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class Mpi4pyCluster(clusters.ClusterEnv):
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name: str = "mpi4py"
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opt_in_only_method: bool = True
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@classmethod
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def is_env_present(cls) -> bool:
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# Relies on mpi4py:
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return find_spec("mpi4py") is not None
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@classmethod
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def get_coordinator_address(cls, timeout_secs: int | None) -> str:
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# Using mpi4py, figure out rank 0 and it's hostname.
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# Then broadcast the hostname and port.
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from mpi4py import MPI #type: ignore
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# Get the global communicator:
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COMM_WORLD = MPI.COMM_WORLD
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# On rank 0, get the hostname:
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if COMM_WORLD.Get_rank() == 0:
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# Order all the hostnames, and find unique ones
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hostname = socket.gethostname()
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# Apparently, we want to pick a port in an ephemeral range...
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port_id = hash(hostname) % 2**12 + (65535 - 2**12 + 1)
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hostname = f'{hostname}:{port_id}'
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else:
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hostname = "None"
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# Broadcast the host_ip to all ranks:
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hostname = COMM_WORLD.bcast(hostname, root=0)
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return hostname
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@classmethod
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def get_process_count(cls) -> int:
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from mpi4py import MPI
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return int(MPI.COMM_WORLD.Get_size())
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@classmethod
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def get_process_id(cls) -> int:
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from mpi4py import MPI
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return int(MPI.COMM_WORLD.Get_rank())
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@classmethod
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def get_local_process_id(cls) -> int | None:
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# Using mpi4py, split the global communicator into sub communicators
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# based on hostname. mpi will assign them ranks and that will allow
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# a selection of the local process ID.
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from mpi4py import MPI
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COMM_WORLD = MPI.COMM_WORLD
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# This is the alternative method that is simpler:
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new_comm = COMM_WORLD.Split_type(MPI.COMM_TYPE_SHARED)
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# The rank in the new communicator - which is host-local only - IS the local rank:
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return int(new_comm.Get_rank())
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@ -25,6 +25,9 @@ _PROCESS_ID = 'OMPI_COMM_WORLD_RANK'
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_LOCAL_PROCESS_ID = 'OMPI_COMM_WORLD_LOCAL_RANK'
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class OmpiCluster(clusters.ClusterEnv):
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name: str = "ompi"
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@classmethod
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def is_env_present(cls) -> bool:
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return _ORTE_URI in os.environ
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@ -25,6 +25,9 @@ _LOCAL_PROCESS_ID = 'SLURM_LOCALID'
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_NUM_NODES = 'SLURM_STEP_NUM_NODES'
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class SlurmCluster(clusters.ClusterEnv):
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name: str = "slurm"
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@classmethod
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def is_env_present(cls) -> bool:
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return _JOBID_PARAM in os.environ
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@ -41,6 +41,7 @@ class State:
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num_processes: int | None = None,
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process_id: int | None = None,
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local_device_ids: int | Sequence[int] | None = None,
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cluster_detection_method: str | None = None,
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initialization_timeout: int = 300,
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coordinator_bind_address: str | None = None):
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coordinator_address = (coordinator_address or
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@ -48,12 +49,14 @@ class State:
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if isinstance(local_device_ids, int):
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local_device_ids = [local_device_ids]
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(coordinator_address, num_processes, process_id, local_device_ids) = (
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clusters.ClusterEnv.auto_detect_unset_distributed_params(
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coordinator_address,
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num_processes,
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process_id,
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local_device_ids,
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cluster_detection_method,
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initialization_timeout,
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)
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)
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@ -84,6 +87,18 @@ class State:
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self.process_id = process_id
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# Emit a warning about PROXY variables if they are in the user's env:
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proxy_vars = [ key for key in os.environ.keys() if '_proxy' in key.lower()]
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if len(proxy_vars) > 0:
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vars = " ".join(proxy_vars) + ". "
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warning = (
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f'JAX detected proxy variable(s) in the environment as distributed setup: {vars}'
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'On some systems, this may cause a hang of distributed.initialize and '
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'you may need to unset these ENV variable(s)'
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)
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logger.warning(warning)
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if process_id == 0:
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if self.service is not None:
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raise RuntimeError('distributed.initialize should only be called once.')
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@ -130,6 +145,7 @@ def initialize(coordinator_address: str | None = None,
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num_processes: int | None = None,
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process_id: int | None = None,
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local_device_ids: int | Sequence[int] | None = None,
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cluster_detection_method: str | None = None,
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initialization_timeout: int = 300,
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coordinator_bind_address: str | None = None):
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"""Initializes the JAX distributed system.
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@ -147,9 +163,20 @@ def initialize(coordinator_address: str | None = None,
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If you are using TPU, Slurm, or Open MPI, all arguments are optional: if omitted, they
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will be chosen automatically.
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The ``cluster_detection_method`` may be used to choose a specific method for detecting those
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distributed arguments. You may pass any of the automatic ``spec_detect_methods`` to this
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argument though it is not necessary in the TPU, Slurm, or Open MPI cases. For other MPI
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installations, if you have a functional ``mpi4py`` installed, you may pass
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``cluster_detection_method="mpi4py"`` to bootstrap the required arguments.
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Otherwise, you must provide the ``coordinator_address``,
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``num_processes``, and ``process_id`` arguments to :func:`~jax.distributed.initialize`.
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Please note: on some systems, particularly HPC clusters that only access external networks
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through proxy variables such as HTTP_PROXY, HTTPS_PROXY, etc., the call to
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:func:`~jax.distributed.initialize` may timeout. You may need to unset these variables
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prior to application launch.
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Args:
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coordinator_address: the IP address of process `0` and a port on which that
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process should launch a coordinator service. The choice of
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@ -166,6 +193,10 @@ def initialize(coordinator_address: str | None = None,
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local_device_ids: Restricts the visible devices of the current process to ``local_device_ids``.
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If ``None``, defaults to all local devices being visible to the process except when processes
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are launched via Slurm and Open MPI on GPUs. In that case, it will default to a single device per process.
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cluster_detection_method: An optional string to attempt to autodetect the configuration of the distributed
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run. Note that "mpi4py" method requires you to have a working ``mpi4py`` install in your environment,
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and launch the applicatoin with an MPI-compatible job launcher such as ``mpiexec`` or ``mpirun``.
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Legacy auto-detect options (OMPI, Slurm) remain enabled.
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initialization_timeout: Time period (in seconds) for which connection will
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be retried. If the initialization takes more than the timeout specified,
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the initialization will error. Defaults to 300 secs i.e. 5 mins.
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@ -197,7 +228,8 @@ def initialize(coordinator_address: str | None = None,
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raise RuntimeError("jax.distributed.initialize() must be called before "
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"any JAX computations are executed.")
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global_state.initialize(coordinator_address, num_processes, process_id,
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local_device_ids, initialization_timeout, coordinator_bind_address)
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local_device_ids, cluster_detection_method,
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initialization_timeout, coordinator_bind_address)
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atexit.register(shutdown)
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@ -33,6 +33,9 @@ from jax._src import util
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from jax.experimental import pjit
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import jax.numpy as jnp
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# Used to test for mpi4py installation and skip tests if not installed
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import importlib.util
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try:
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import portpicker
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except ImportError:
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@ -218,6 +221,46 @@ class MultiProcessGpuTest(jtu.JaxTestCase):
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finally:
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proc.kill()
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def test_gpu_mpi4py_distributed_initialize(self):
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if not jtu.test_device_matches(['gpu']):
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raise unittest.SkipTest('Tests only for GPU.')
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if shutil.which('mpirun') is None:
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raise unittest.SkipTest('Tests only for MPI (mpirun not found).')
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if importlib.util.find_spec("mpi4py") is None:
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raise unittest.SkipTest('Test of mpi4py initialize only possible with mpi4py installed.')
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num_gpus = 4
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num_gpus_per_task = 1
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with contextlib.ExitStack() as exit_stack:
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args = [
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'mpirun',
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'--oversubscribe',
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'--allow-run-as-root',
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'-n',
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str(num_gpus),
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sys.executable,
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'-c',
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('import jax, os; '
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'jax.distributed.initialize(spec_detection_method="mpi4py"); '
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'print(f\'{jax.local_device_count()},{jax.device_count()}\' if jax.process_index() == 0 else \'\', end="")'
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)
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]
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env = os.environ.copy()
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# In case the job was launched via Slurm,
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# prevent OpenMPI from detecting Slurm environment
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env.pop('SLURM_JOBID', None)
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proc = subprocess.Popen(args, env=env, stdout=subprocess.PIPE,
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stderr=subprocess.PIPE, universal_newlines=True)
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proc = exit_stack.enter_context(proc)
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try:
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out, _ = proc.communicate()
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self.assertEqual(proc.returncode, 0)
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self.assertEqual(out, f'{num_gpus_per_task},{num_gpus}')
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finally:
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proc.kill()
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@unittest.skipIf(
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os.environ.get("SLURM_JOB_NUM_NODES", None) != "2",
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